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Hi i have a 07 civic SI 6speed. I just recently replaced the throwout bearing and now i am lossing my clutch pedal @ and above 4k rpms not allowing me to shift till the rpms come way down. I did bleed the slave but still having this issue. Any help would be great.

 
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Correct.
yes, all fluids are topped off and full

 
Rep Power: 103

try adjusting like this:
https://www.8thcivic.com/forums/diy-...ch-adjust.html

i've had good results adjusting CMC rods under dash on other vehicle makes, never had an issue in a honda though. still where i would start as it's FREE to try.

or google "omni cmc clutch master civic si 08 09" if you want a master with more push.

curiously.. does it do it more when hot?

 
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i adjusted the CMC and the only time it doesnt lose pressure is when i have the CMC adjusted to where the throwout is sitting on the clutch. Or atleast it feels like it is.